Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | EGT48_11590 | Not Available | Negative | 2246106 - 2246588 | 17890.4 |
| ygiw/ydei family stress tolerance ob fold protein | EGT48_11595 | Not Available | Negative | 2246641 - 2247033 | 14011.5 |
| two-component system response regulator qseb | EGT48_11600 | Not Available | Positive | 2247185 - 2247844 | 24689.2 |
| two-component system sensor histidine kinase qsec | EGT48_11605 | Not Available | Positive | 2247841 - 2249190 | 50174.5 |
| duf2645 family protein | EGT48_11610 | Not Available | Negative | 2249236 - 2249568 | 13244.7 |
| modulator of drug activity b | EGT48_11620 | Not Available | Positive | 2251018 - 2251599 | 21892.1 |
| antibiotic biosynthesis monooxygenase | EGT48_11625 | Not Available | Positive | 2251630 - 2251944 | 11533.1 |
| murr/rpir family transcriptional regulator | EGT48_11630 | Not Available | Negative | 2251989 - 2252876 | 32250.4 |
| iron-siderophore abc transporter substrate-binding protein | EGT48_11635 | Not Available | Negative | 2252873 - 2253820 | 34477.7 |
| iron abc transporter permease | EGT48_11640 | Not Available | Negative | 2253831 - 2254868 | 36471.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





