Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysialic acid transporter kpsd | EGT48_11180 | Not Available | Positive | 2153430 - 2155106 | 60388.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | EGT48_11185 | Not Available | Positive | 2155116 - 2155856 | 27160.7 |
| capsular polysaccharide biosynthesis protein | EGT48_11190 | Not Available | Positive | 2155853 - 2157880 | 75657.5 |
| capsular biosynthesis protein | EGT48_11195 | Not Available | Positive | 2157915 - 2159108 | 47328.3 |
| antibiotic acetyltransferase | EGT48_11200 | Not Available | Negative | 2159653 - 2160282 | 23345.1 |
| abc transporter atp-binding protein | EGT48_11215 | Not Available | Negative | 2163695 - 2164363 | 25106.1 |
| abc transporter permease | EGT48_11220 | Not Available | Negative | 2164360 - 2165136 | 29534.4 |
| type ii secretion system protein | EGT48_11225 | Not Available | Negative | 2166293 - 2166871 | 22064.8 |
| type ii secretion system protein gspl | EGT48_11230 | Not Available | Negative | 2166873 - 2168051 | 44346.5 |
| general secretion pathway protein gspk | EGT48_11235 | Not Available | Negative | 2168048 - 2169025 | 36545.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





