Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf987 domain-containing protein | EGT48_11125 | Not Available | Positive | 2145018 - 2145239 | 8441.23 |
| antitoxin of toxin-antitoxin stability system | EGT48_11130 | Not Available | Positive | 2145258 - 2145902 | 25011.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | EGT48_11135 | Not Available | Positive | 2145952 - 2146320 | 13561.1 |
| toxin | EGT48_11140 | Not Available | Positive | 2146409 - 2146786 | 14057.9 |
| hypothetical protein | EGT48_11145 | Not Available | Positive | 2146783 - 2147271 | 18003.3 |
| duf957 domain-containing protein | EGT48_11150 | Not Available | Positive | 2147288 - 2147485 | 7494.95 |
| duf4942 domain-containing protein | EGT48_11155 | Not Available | Positive | 2147570 - 2148415 | 32660.3 |
| s-adenosylhomocysteine hydrolase | EGT48_11160 | Not Available | Positive | 2148484 - 2148879 | 14641.0 |
| arabinose 5-phosphate isomerase kpsf | EGT48_11170 | Not Available | Positive | 2151203 - 2152186 | 35565.1 |
| capsule polysaccharide export inner-membrane protein kpse | EGT48_11175 | Not Available | Positive | 2152258 - 2153406 | 43046.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





