Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EGT48_11070 | Not Available | Negative | 2135474 - 2135695 | 8214.2 |
| hypothetical protein | EGT48_11075 | Not Available | Positive | 2136121 - 2136315 | 7801.18 |
| gtpase family protein | EGT48_11080 | Not Available | Positive | 2136611 - 2137483 | 32455.8 |
| autotransporter adhesin ag43 | EGT48_11085 | Not Available | Positive | 2137817 - 2140939 | 107066.0 |
| hypothetical protein | EGT48_11090 | Not Available | Positive | 2141001 - 2142161 | 40784.6 |
| hypothetical protein | EGT48_11095 | Not Available | Positive | 2142237 - 2142692 | 16903.1 |
| duf905 domain-containing protein | EGT48_11100 | Not Available | Positive | 2142771 - 2143004 | 8738.36 |
| duf945 domain-containing protein | EGT48_11110 | Not Available | Positive | 2143105 - 2143923 | 31143.3 |
| antirestriction protein | EGT48_11115 | Not Available | Positive | 2143978 - 2144463 | 18156.4 |
| dna repair protein radc | EGT48_11120 | Not Available | Positive | 2144479 - 2144955 | 17674.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





