Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | EGT48_11015 | Not Available | Positive | 2128100 - 2129638 | 57747.1 |
| hypothetical protein | EGT48_11025 | Not Available | Negative | 2129859 - 2130242 | 14857.3 |
| inovirus gp2 family protein | EGT48_11030 | Not Available | Negative | 2130409 - 2130978 | 21797.0 |
| hypothetical protein | EGT48_11035 | Not Available | Positive | 2131177 - 2131374 | 7249.25 |
| hypothetical protein | EGT48_11040 | Not Available | Negative | 2131487 - 2131687 | 7657.98 |
| hemolysin activation protein | EGT48_11045 | Not Available | Negative | 2131707 - 2131856 | 5723.9 |
| hypothetical protein | EGT48_11050 | Not Available | Positive | 2132601 - 2132807 | 7826.55 |
| alpa family transcriptional regulator | EGT48_11055 | Not Available | Positive | 2132750 - 2133010 | 9964.14 |
| hypothetical protein | EGT48_11060 | Not Available | Positive | 2133096 - 2133668 | 22241.3 |
| duf3987 domain-containing protein | EGT48_11065 | Not Available | Negative | 2133789 - 2135279 | 56194.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





