Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EGT48_10770 | Not Available | Positive | 2084640 - 2084855 | 8222.09 |
| is3 family transposase | EGT48_10775 | Not Available | Negative | 2084824 - 2085950 | 43486.8 |
| hypothetical protein | EGT48_10780 | Not Available | Negative | 2086041 - 2086154 | 4374.52 |
| hypothetical protein | EGT48_10790 | Not Available | Positive | 2087677 - 2087991 | 11902.2 |
| duf1471 domain-containing protein | EGT48_10795 | Not Available | Positive | 2087988 - 2088248 | 9180.03 |
| tetr/acrr family transcriptional regulator | EGT48_10800 | Not Available | Positive | 2088290 - 2088850 | 20925.3 |
| duf417 family protein | EGT48_10805 | Not Available | Positive | 2088890 - 2089318 | 15944.3 |
| mfs transporter | EGT48_10815 | Not Available | Negative | 2090036 - 2091229 | 41230.2 |
| iuca/iucc family siderophore biosynthesis protein | EGT48_10820 | Not Available | Positive | 2091365 - 2093089 | 65064.6 |
| n-acetyltransferase | EGT48_10825 | Not Available | Positive | 2093090 - 2094037 | 37219.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





