Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | EGT48_10645 | Not Available | Positive | 2062704 - 2063207 | 18320.3 |
| trap transporter large permease subunit | EGT48_10650 | Not Available | Positive | 2063207 - 2064508 | 45796.4 |
| duf1202 family protein | EGT48_10655 | Not Available | Negative | 2064564 - 2065571 | 38506.4 |
| l-asparaginase 2 | EGT48_10660 | Not Available | Negative | 2065688 - 2066734 | 36851.7 |
| duf2884 family protein | EGT48_10665 | Not Available | Negative | 2066910 - 2067629 | 26430.8 |
| duf469 domain-containing protein | EGT48_10670 | Not Available | Negative | 2067813 - 2068139 | 12823.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | EGT48_10675 | Not Available | Negative | 2068139 - 2068858 | 27308.9 |
| adenine dna glycosylase | EGT48_10680 | Not Available | Positive | 2069019 - 2070071 | 39255.3 |
| oxidative damage protection protein | EGT48_10685 | Not Available | Positive | 2070099 - 2070374 | 10953.2 |
| membrane-bound lytic murein transglycosylase mltc | EGT48_10690 | Not Available | Positive | 2070439 - 2071518 | 40114.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





