Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel mscs | EGT48_10445 | Not Available | Negative | 2026714 - 2027574 | 30870.8 |
| class ii fructose-bisphosphate aldolase | EGT48_10450 | Not Available | Negative | 2027765 - 2028844 | 39149.4 |
| phosphoglycerate kinase | EGT48_10455 | Not Available | Negative | 2029058 - 2030221 | 41120.5 |
| erythrose-4-phosphate dehydrogenase | EGT48_10460 | Not Available | Negative | 2030271 - 2031290 | 37301.5 |
| duf296 domain-containing protein | EGT48_10465 | Not Available | Positive | 2031662 - 2032093 | 15551.9 |
| ecf transporter s component | EGT48_10470 | Not Available | Positive | 2032116 - 2032694 | 20238.9 |
| energy-coupling factor transporter transmembrane protein ecft | EGT48_10475 | Not Available | Positive | 2032695 - 2033402 | 26647.2 |
| atp-binding cassette domain-containing protein | EGT48_10480 | Not Available | Positive | 2033390 - 2034067 | 25082.4 |
| sulfate/molybdate abc transporter atp-binding protein | EGT48_10485 | Not Available | Positive | 2034061 - 2034738 | 24892.9 |
| nucleoside/nucleotide kinase family protein | EGT48_10490 | Not Available | Negative | 2034710 - 2035423 | 26824.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





