Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | EGT48_10285 | Not Available | Negative | 1998347 - 1999445 | 41222.9 |
| single-stranded-dna-specific exonuclease recj | EGT48_10290 | Not Available | Negative | 1999536 - 2001269 | 63362.6 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | EGT48_10295 | Not Available | Negative | 2001275 - 2001985 | 25637.1 |
| tyrosine recombinase xerd | EGT48_10300 | Not Available | Negative | 2002010 - 2002906 | 34248.4 |
| flavodoxin-2 | EGT48_10305 | Not Available | Positive | 2003018 - 2003539 | 19701.2 |
| hypothetical protein | EGT48_10310 | Not Available | Negative | 2003579 - 2003986 | 16077.0 |
| fad assembly factor sdhe | EGT48_10315 | Not Available | Negative | 2003967 - 2004233 | 10535.7 |
| pp_02029 | EGT48_10320 | Not Available | Positive | 2004476 - 2005456 | Not Available |
| hemolysin iii family protein | EGT48_10325 | Not Available | Negative | 2005533 - 2006192 | 23876.3 |
| asch domain-containing protein | EGT48_10330 | Not Available | Negative | 2006356 - 2006667 | 11964.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





