Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase csda | EGT48_09760 | Not Available | Positive | 1868511 - 1869716 | 43307.6 |
| cysteine desulfurase sulfur acceptor subunit csde | EGT48_09765 | Not Available | Positive | 1869716 - 1870159 | 15925.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | EGT48_09770 | Not Available | Negative | 1870210 - 1871016 | 28562.6 |
| murein transglycosylase a | EGT48_09775 | Not Available | Negative | 1871093 - 1872190 | 40441.0 |
| Trna-met | Not Available | Not Available | Positive | 1872399 - 1872475 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1872509 - 1872585 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1872619 - 1872695 | Not Available |
| type vi secretion system contractile sheath small subunit | EGT48_09795 | Not Available | Positive | 1873331 - 1873831 | 18710.3 |
| type vi secretion system contractile sheath large subunit | EGT48_09800 | Not Available | Positive | 1873890 - 1875428 | 57965.6 |
| type vi secretion system baseplate subunit tssk | EGT48_09805 | Not Available | Positive | 1875446 - 1876783 | 49689.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





