Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | EGT48_09660 | Not Available | Negative | 1847659 - 1848108 | 16316.2 |
| trna pseudouridine(65) synthase truc | EGT48_09665 | Not Available | Negative | 1848126 - 1848908 | 29637.4 |
| yqcc family protein | EGT48_09670 | Not Available | Negative | 1848908 - 1849237 | 12773.2 |
| protein syd | EGT48_09675 | Not Available | Negative | 1849859 - 1850404 | 20737.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | EGT48_09680 | Not Available | Positive | 1850472 - 1851320 | 32573.2 |
| log family protein ygdh | EGT48_09685 | Not Available | Positive | 1851432 - 1852796 | 50975.0 |
| haaap family serine/threonine permease | EGT48_09690 | Not Available | Positive | 1853353 - 1854642 | 46923.3 |
| l-serine ammonia-lyase | EGT48_09695 | Not Available | Positive | 1854700 - 1856067 | 48725.8 |
| flap endonuclease xni | EGT48_09700 | Not Available | Positive | 1856179 - 1856934 | 28136.7 |
| lactaldehyde reductase | EGT48_09705 | Not Available | Negative | 1857039 - 1858187 | 40631.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





