Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | EGT48_09355 | Not Available | Positive | 1779456 - 1780577 | 41366.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1780011 - 1780194 | Not Available |
| hydrogenase expression/formation protein hype | EGT48_09360 | Not Available | Positive | 1780574 - 1781584 | 35036.5 |
| formate hydrogenlyase transcriptional activator flha | EGT48_09365 | Not Available | Positive | 1781658 - 1783736 | 78456.5 |
| transporter | EGT48_09370 | Not Available | Positive | 1783781 - 1784209 | 14508.6 |
| nitrous oxide-stimulated promoter family protein | EGT48_09375 | Not Available | Negative | 1784248 - 1784592 | 13549.8 |
| dna mismatch repair protein muts | EGT48_09380 | Not Available | Positive | 1784878 - 1787439 | 95338.6 |
| protein-serine/threonine phosphatase | EGT48_09385 | Not Available | Positive | 1787545 - 1788201 | 25101.7 |
| deor/glpr transcriptional regulator | EGT48_09390 | Not Available | Negative | 1788252 - 1789019 | 27472.4 |
| nad(p)-dependent oxidoreductase | EGT48_09395 | Not Available | Positive | 1789215 - 1790123 | 30719.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





