Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuob | EGT48_09305 | Not Available | Negative | 1770763 - 1771530 | 28025.8 |
| 4fe-4s dicluster domain-containing protein | EGT48_09310 | Not Available | Negative | 1771530 - 1772072 | 20328.4 |
| hydrogenase large subunit | EGT48_09315 | Not Available | Negative | 1772082 - 1773791 | 64922.0 |
| hydrogenase 3 membrane subunit | EGT48_09320 | Not Available | Negative | 1773809 - 1774732 | 33059.4 |
| formate hydrogenlyase subunit 3 | EGT48_09325 | Not Available | Negative | 1774735 - 1776561 | 64129.2 |
| 4fe-4s dicluster domain-containing protein | EGT48_09330 | Not Available | Negative | 1776558 - 1777169 | 21906.4 |
| formate hydrogenlyase regulator hyca | EGT48_09335 | Not Available | Negative | 1777294 - 1777755 | 17656.0 |
| protein hypa | EGT48_09340 | Not Available | Positive | 1777967 - 1778317 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | EGT48_09345 | Not Available | Positive | 1778321 - 1779193 | 31566.8 |
| hydrogenase assembly protein hypc | EGT48_09350 | Not Available | Positive | 1779184 - 1779456 | 9732.58 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





