Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-5-phosphate isomerase gutq | EGT48_09250 | Not Available | Positive | 1759898 - 1760863 | 34129.7 |
| norr family transcriptional regulator | EGT48_09255 | Not Available | Negative | 1760860 - 1762374 | 55189.6 |
| anaerobic nitric oxide reductase flavorubredoxin | EGT48_09260 | Not Available | Positive | 1762561 - 1764000 | 54194.0 |
| nadh:flavorubredoxin reductase norw | EGT48_09265 | Not Available | Positive | 1763997 - 1765130 | 41347.1 |
| carbamoyltransferase hypf | EGT48_09270 | Not Available | Negative | 1765352 - 1767604 | 81747.4 |
| electron transporter hydn | EGT48_09275 | Not Available | Negative | 1767757 - 1768284 | 19027.2 |
| hypothetical protein | EGT48_09285 | Not Available | Positive | 1768712 - 1769149 | 16611.5 |
| helix-turn-helix domain-containing protein | EGT48_09290 | Not Available | Negative | 1769241 - 1769660 | 15417.2 |
| hydrogenase maturation peptidase hyci | EGT48_09295 | Not Available | Negative | 1769896 - 1770363 | 16884.4 |
| formate hydrogenlyase maturation protein hych | EGT48_09300 | Not Available | Negative | 1770356 - 1770766 | 15451.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





