Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | EGT48_09150 | Not Available | Negative | 1746548 - 1746976 | 15576.6 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | EGT48_09155 | Not Available | Negative | 1746973 - 1747539 | 20800.1 |
| Trna-arg | Not Available | Not Available | Positive | 1747820 - 1747896 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1747960 - 1748036 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1748099 - 1748175 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1748240 - 1748316 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1748320 - 1748412 | Not Available |
| carbon storage regulator | EGT48_09185 | Not Available | Negative | 1748728 - 1748913 | 6856.34 |
| alanine--trna ligase | EGT48_09190 | Not Available | Negative | 1749148 - 1751778 | 96009.8 |
| recombination regulator recx | EGT48_09195 | Not Available | Negative | 1751907 - 1752407 | 19358.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





