Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | EGT48_08635 | Not Available | Negative | 1661011 - 1662372 | 49790.5 |
| inner membrane protein ypjd | EGT48_08640 | Not Available | Positive | 1662539 - 1663330 | 29312.0 |
| duf21 domain-containing protein | EGT48_08645 | Not Available | Positive | 1663396 - 1664637 | 46353.9 |
| nucleotide exchange factor grpe | EGT48_08650 | Not Available | Negative | 1664691 - 1665284 | 21813.1 |
| molecular chaperone grpe | EGT48_08655 | Not Available | Negative | 1665281 - 1665475 | 7103.64 |
| nad(+) kinase | EGT48_08660 | Not Available | Positive | 1665407 - 1666285 | 32583.3 |
| dna repair protein recn | EGT48_08665 | Not Available | Positive | 1666371 - 1668032 | 61458.1 |
| outer membrane protein assembly factor bame | EGT48_08670 | Not Available | Positive | 1668181 - 1668522 | 12302.8 |
| rnfh family protein | EGT48_08675 | Not Available | Negative | 1668584 - 1668874 | 10816.1 |
| type ii toxin-antitoxin system rata family toxin | EGT48_08680 | Not Available | Negative | 1668864 - 1669340 | 17686.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





