Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease 3 | EGT48_08420 | Not Available | Negative | 1618318 - 1618998 | 25551.6 |
| s26 family signal peptidase | EGT48_08425 | Not Available | Negative | 1619270 - 1620244 | 35948.3 |
| elongation factor 4 | EGT48_08430 | Not Available | Negative | 1620260 - 1622059 | 66602.2 |
| soxr-reducing system protein rsec | EGT48_08435 | Not Available | Negative | 1622257 - 1622736 | 16641.3 |
| sigma-e factor regulatory protein rseb | EGT48_08440 | Not Available | Negative | 1622733 - 1623689 | 35777.9 |
| anti-sigma-e factor rsea | EGT48_08445 | Not Available | Negative | 1623689 - 1624339 | 24322.8 |
| ecf rna polymerase sigma-e factor | EGT48_08450 | Not Available | Negative | 1624372 - 1624947 | 21697.0 |
| rpoe leader peptide rsed | EGT48_08455 | Not Available | Negative | 1624944 - 1625099 | 6229.83 |
| l-aspartate oxidase | EGT48_08460 | Not Available | Positive | 1625355 - 1626977 | 60195.7 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | EGT48_08465 | Not Available | Negative | 1626962 - 1627699 | 27274.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





