Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EGT48_07720 | Not Available | Negative | 1454694 - 1455578 | 33582.3 |
| xapx domain-containing protein | EGT48_07725 | Not Available | Negative | 1455619 - 1455777 | 5691.39 |
| nucleoside permease | EGT48_07730 | Not Available | Negative | 1455830 - 1457086 | 46150.4 |
| xanthosine phosphorylase | EGT48_07735 | Not Available | Negative | 1457147 - 1457980 | 29892.5 |
| hypothetical protein | EGT48_07740 | Not Available | Positive | 1458229 - 1458993 | 29238.6 |
| lysr family transcriptional regulator | EGT48_07745 | Not Available | Negative | 1459032 - 1459958 | 33905.1 |
| bile acid:sodium symporter | EGT48_07750 | Not Available | Positive | 1460048 - 1461046 | 36377.8 |
| hypothetical protein | EGT48_07755 | Not Available | Negative | 1461043 - 1461261 | 8427.63 |
| nad-dependent dna ligase liga | EGT48_07760 | Not Available | Negative | 1461263 - 1463278 | 73631.3 |
| cell division protein zipa | EGT48_07765 | Not Available | Negative | 1463349 - 1464347 | 36997.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





