Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family transcriptional regulator | EGT48_07510 | Not Available | Negative | 1410502 - 1410729 | 8789.66 |
| dna-binding transcriptional regulator dsdc | EGT48_07520 | Not Available | Negative | 1411304 - 1412239 | 35373.1 |
| d-serine transporter dsdx | EGT48_07525 | Not Available | Positive | 1412457 - 1413794 | 47154.1 |
| d-serine dehydratase | EGT48_07530 | Not Available | Positive | 1413812 - 1415140 | 47903.3 |
| multidrug efflux mfs transporter permease subunit emry | EGT48_07535 | Not Available | Negative | 1415248 - 1416786 | 56004.4 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | EGT48_07540 | Not Available | Negative | 1416786 - 1417949 | 42507.9 |
| dna-binding response regulator | EGT48_07545 | Not Available | Positive | 1418365 - 1418979 | 22691.5 |
| acid-sensing system histidine kinase evgs | EGT48_07550 | Not Available | Positive | 1418984 - 1422577 | 134908.0 |
| coa:oxalate coa-transferase | EGT48_07555 | Not Available | Negative | 1422633 - 1423778 | 41769.3 |
| transporter yfdv | EGT48_07560 | Not Available | Negative | 1423852 - 1424796 | 33617.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





