Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf412 domain-containing protein | EGT48_07180 | Not Available | Negative | 1345858 - 1346313 | 17214.1 |
| acetate kinase | EGT48_07185 | Not Available | Positive | 1346651 - 1347853 | 43293.0 |
| phosphate acetyltransferase | EGT48_07190 | Not Available | Positive | 1347928 - 1350072 | 77217.6 |
| putative basic amino acid antiporter yfcc | EGT48_07195 | Not Available | Positive | 1350262 - 1351782 | 54814.1 |
| nudix hydrolase yfcd | EGT48_07200 | Not Available | Negative | 1351815 - 1352357 | 20376.9 |
| phosphodiesterase | EGT48_07205 | Not Available | Negative | 1352415 - 1352966 | 19992.1 |
| glutathione transferase | EGT48_07210 | Not Available | Negative | 1353022 - 1353666 | 24298.9 |
| gsh-dependent disulfide bond oxidoreductase | EGT48_07215 | Not Available | Positive | 1353802 - 1354449 | 24524.2 |
| dihydroneopterin triphosphate 2'-epimerase | EGT48_07220 | Not Available | Positive | 1354506 - 1354868 | 14112.9 |
| tigr01777 family protein | EGT48_07225 | Not Available | Positive | 1354889 - 1355782 | 32752.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





