Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | EGT48_06980 | Not Available | Negative | 1302078 - 1302680 | 22394.9 |
| udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferase | EGT48_06985 | Not Available | Positive | 1302988 - 1304127 | 41623.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | EGT48_06990 | Not Available | Positive | 1304131 - 1305099 | 36222.2 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | EGT48_06995 | Not Available | Positive | 1305099 - 1307081 | 74334.2 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase arnd | EGT48_07000 | Not Available | Positive | 1307078 - 1307968 | 33023.5 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | EGT48_07005 | Not Available | Positive | 1307968 - 1309620 | 62500.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | EGT48_07010 | Not Available | Positive | 1309617 - 1309952 | 12166.6 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | EGT48_07015 | Not Available | Positive | 1309952 - 1310338 | 14058.0 |
| signal transduction protein pmrd | EGT48_07020 | Not Available | Negative | 1310332 - 1310598 | 9858.05 |
| o-succinylbenzoate--coa ligase | EGT48_07025 | Not Available | Negative | 1310708 - 1312063 | 50140.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





