Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | EGT48_06880 | Not Available | Positive | 1276896 - 1277618 | 26575.0 |
| aida-i family autotransporter yfal | EGT48_06885 | Not Available | Negative | 1277758 - 1281516 | 131906.0 |
| ribonucleoside-diphosphate reductase subunit alpha | EGT48_06890 | Not Available | Positive | 1282198 - 1284483 | 85722.9 |
| ribonucleotide-diphosphate reductase subunit beta | EGT48_06895 | Not Available | Positive | 1284572 - 1285702 | 43503.6 |
| 2fe-2s ferredoxin-like protein | EGT48_06900 | Not Available | Positive | 1285702 - 1285956 | 9293.29 |
| lipopolysaccharide kinase inaa | EGT48_06905 | Not Available | Negative | 1286010 - 1286660 | 25299.5 |
| glycerophosphodiester phosphodiesterase | EGT48_06910 | Not Available | Negative | 1286863 - 1287939 | 40886.6 |
| glycerol-3-phosphate transporter | EGT48_06915 | Not Available | Negative | 1287944 - 1289302 | 50312.3 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | EGT48_06920 | Not Available | Positive | 1289575 - 1291203 | 58943.8 |
| glycerol-3-phosphate dehydrogenase subunit glpb | EGT48_06925 | Not Available | Positive | 1291193 - 1292452 | 45382.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





