Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin j25 efflux abc transporter yoji | EGT48_06780 | Not Available | Negative | 1244283 - 1245926 | 61599.4 |
| dna oxidative demethylase alkb | EGT48_06785 | Not Available | Negative | 1246002 - 1246652 | 24034.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | EGT48_06790 | Not Available | Negative | 1246652 - 1247716 | 39354.0 |
| fad:protein fmn transferase apbe | EGT48_06795 | Not Available | Negative | 1247790 - 1248845 | 38561.0 |
| porin ompc | EGT48_06800 | Not Available | Negative | 1248957 - 1250078 | 41207.3 |
| phosphotransferase rcsd | EGT48_06805 | Not Available | Positive | 1250817 - 1253489 | 100340.0 |
| dna-binding response regulator | EGT48_06810 | Not Available | Positive | 1253506 - 1254156 | 23672.0 |
| two-component system sensor histidine kinase rcsc | EGT48_06815 | Not Available | Negative | 1254356 - 1257205 | 106597.0 |
| two-component system sensor histidine kinase atos | EGT48_06820 | Not Available | Positive | 1257372 - 1259198 | 67844.2 |
| acetoacetate metabolism regulator atoc | EGT48_06825 | Not Available | Positive | 1259195 - 1260580 | 52137.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





