Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis heme-transporting atpase ccma | EGT48_06730 | Not Available | Negative | 1234897 - 1235520 | 23084.7 |
| cytochrome c-type protein napc | EGT48_06735 | Not Available | Negative | 1235533 - 1236135 | 23101.8 |
| periplasmic nitrate reductase electron transfer subunit | EGT48_06740 | Not Available | Negative | 1236145 - 1236594 | 16297.4 |
| ferredoxin-type protein naph | EGT48_06745 | Not Available | Negative | 1236591 - 1237454 | 31889.4 |
| ferredoxin-type protein napg | EGT48_06750 | Not Available | Negative | 1237441 - 1238136 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | EGT48_06755 | Not Available | Negative | 1238143 - 1240629 | 93061.0 |
| chaperone napd | EGT48_06760 | Not Available | Negative | 1240626 - 1240889 | 9473.02 |
| ferredoxin-type protein napf | EGT48_06765 | Not Available | Negative | 1240879 - 1241373 | 18078.4 |
| ecotin | EGT48_06770 | Not Available | Positive | 1241781 - 1242269 | 18166.0 |
| malate dehydrogenase (quinone) | EGT48_06775 | Not Available | Negative | 1242419 - 1244065 | 60247.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





