Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeih family protein | EGT48_06525 | Not Available | Positive | 1191765 - 1192814 | 36914.4 |
| endonuclease | EGT48_06530 | Not Available | Positive | 1192888 - 1193745 | 31463.2 |
| sugar kinase | EGT48_06535 | Not Available | Positive | 1193749 - 1194837 | 40115.1 |
| pyrimidine-specific ribonucleoside hydrolase rihb | EGT48_06540 | Not Available | Negative | 1195105 - 1196046 | 33777.1 |
| transcriptional regulator yeil | EGT48_06545 | Not Available | Positive | 1196176 - 1196874 | 26867.6 |
| nupc/nupg family nucleoside cnt transporter | EGT48_06550 | Not Available | Negative | 1196941 - 1198191 | 43470.4 |
| pseudouridine-5'-phosphate glycosidase | EGT48_06555 | Not Available | Negative | 1198285 - 1199223 | 32991.9 |
| pseudouridine kinase | EGT48_06560 | Not Available | Negative | 1199211 - 1200152 | 33632.0 |
| pts fructose transporter subunit iibc | EGT48_06565 | Not Available | Negative | 1200608 - 1202299 | 57696.9 |
| 1-phosphofructokinase | EGT48_06570 | Not Available | Negative | 1202316 - 1203254 | 33757.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





