Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EGT48_06370 | Not Available | Negative | 1157796 - 1158527 | 25564.2 |
| abc transporter atp-binding protein | EGT48_06375 | Not Available | Negative | 1158532 - 1159458 | 34471.6 |
| abc transporter permease | EGT48_06380 | Not Available | Negative | 1159451 - 1160608 | 41193.2 |
| abc transporter substrate-binding protein | EGT48_06385 | Not Available | Negative | 1160615 - 1161532 | 32586.0 |
| beta-glucosidase bglx | EGT48_06390 | Not Available | Negative | 1161722 - 1164019 | 83548.8 |
| d-lactate dehydrogenase | EGT48_06395 | Not Available | Positive | 1164215 - 1165930 | 64696.0 |
| d-alanyl-d-alanine endopeptidase | EGT48_06400 | Not Available | Negative | 1165969 - 1166901 | 33889.4 |
| yip1 family protein | EGT48_06405 | Not Available | Negative | 1167075 - 1167662 | 21692.0 |
| deda family protein | EGT48_06410 | Not Available | Positive | 1167832 - 1168410 | 21422.9 |
| sdr family oxidoreductase | EGT48_06415 | Not Available | Negative | 1168540 - 1169301 | 26864.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





