Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EGT48_06215 | Not Available | Positive | 1116694 - 1117971 | 47349.8 |
| adp-ribosylglycohydrolase family protein | EGT48_06220 | Not Available | Positive | 1117968 - 1118972 | 35578.5 |
| sugar kinase | EGT48_06225 | Not Available | Positive | 1118969 - 1119934 | 34380.4 |
| gntr family transcriptional regulator | EGT48_06230 | Not Available | Negative | 1119908 - 1120654 | 28280.8 |
| glycoside hydrolase family 25 protein | EGT48_06235 | Not Available | Negative | 1120706 - 1121524 | 31777.9 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EGT48_06240 | Not Available | Negative | 1121589 - 1122389 | 28666.3 |
| hydroxyethylthiazole kinase | EGT48_06245 | Not Available | Negative | 1122386 - 1123174 | 27328.7 |
| transcriptional regulator | EGT48_06250 | Not Available | Negative | 1123397 - 1123669 | 10134.5 |
| nickel/cobalt efflux protein rcna | EGT48_06255 | Not Available | Positive | 1123790 - 1124614 | 30475.2 |
| nickel/cobalt homeostasis protein rcnb | EGT48_06260 | Not Available | Positive | 1124833 - 1125171 | 12466.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





