Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-l-fucose synthase | EGT48_06010 | Not Available | Negative | 1066360 - 1067325 | 36103.1 |
| gdp-mannose 4,6-dehydratase | EGT48_06015 | Not Available | Negative | 1067328 - 1068449 | 42049.2 |
| colanic acid biosynthesis acetyltransferase wcaf | EGT48_06020 | Not Available | Negative | 1068476 - 1069024 | 19999.3 |
| colanic acid biosynthesis glycosyltransferase wcae | EGT48_06025 | Not Available | Negative | 1069040 - 1069786 | 27914.4 |
| putative colanic acid polymerase wcad | EGT48_06030 | Not Available | Negative | 1069867 - 1071087 | 45545.4 |
| colanic acid biosynthesis glycosyltransferase wcac | EGT48_06035 | Not Available | Negative | 1071062 - 1072279 | 45268.6 |
| colanic acid biosynthesis acetyltransferase wcab | EGT48_06040 | Not Available | Negative | 1072276 - 1072764 | 17588.5 |
| colanic acid biosynthesis glycosyltransferase wcaa | EGT48_06045 | Not Available | Negative | 1072767 - 1073606 | 33064.6 |
| tyrosine-protein kinase wzc | EGT48_06050 | Not Available | Negative | 1073735 - 1075897 | 79344.7 |
| low molecular weight protein-tyrosine-phosphatase wzb | EGT48_06055 | Not Available | Negative | 1075900 - 1076343 | 16661.2 |
Pathways
1412 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





