Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | EGT48_05910 | Not Available | Negative | 1043143 - 1044243 | 43310.3 |
| acetyltransferase | EGT48_05915 | Not Available | Negative | 1044228 - 1044833 | 22224.4 |
| hypothetical protein | EGT48_05920 | Not Available | Negative | 1044904 - 1046121 | 46450.6 |
| glycosyltransferase | EGT48_05925 | Not Available | Negative | 1046093 - 1047241 | 44059.5 |
| glycosyltransferase family 2 protein | EGT48_05930 | Not Available | Negative | 1047304 - 1048269 | 37109.6 |
| flippase | EGT48_05935 | Not Available | Negative | 1048274 - 1049533 | 46965.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EGT48_05940 | Not Available | Negative | 1049535 - 1050077 | 20645.6 |
| glucose-1-phosphate thymidylyltransferase rfba | EGT48_05945 | Not Available | Negative | 1050082 - 1050960 | 32483.2 |
| dtdp-4-dehydrorhamnose reductase | EGT48_05950 | Not Available | Negative | 1051018 - 1051917 | 32648.8 |
| dtdp-glucose 4,6-dehydratase | EGT48_05955 | Not Available | Negative | 1051917 - 1053002 | 40704.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





