Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is200/is605 family transposase | EGT48_05800 | Not Available | Negative | 1025929 - 1026387 | 17974.9 |
| amino acid transporter | EGT48_05810 | Not Available | Negative | 1026604 - 1027962 | 49554.6 |
| membrane protein yoei | EGT48_05815 | Not Available | Negative | 1027952 - 1028014 | 2241.66 |
| lysr family transcriptional regulator | EGT48_05820 | Not Available | Negative | 1028229 - 1029158 | 34186.0 |
| nad(p)-dependent oxidoreductase | EGT48_05825 | Not Available | Negative | 1029204 - 1030028 | 29681.7 |
| txe/yoeb family addiction module toxin | EGT48_05830 | Not Available | Negative | 1030111 - 1030365 | 10143.1 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | EGT48_05835 | Not Available | Negative | 1030362 - 1030613 | 9366.16 |
| his operon leader peptide | EGT48_05845 | Not Available | Positive | 1030896 - 1030946 | 2081.43 |
| atp phosphoribosyltransferase | EGT48_05850 | Not Available | Positive | 1031092 - 1031991 | 33368.8 |
| histidinol dehydrogenase | EGT48_05855 | Not Available | Positive | 1031997 - 1033301 | 46214.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





