Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-gdp ribazoletransferase | EGT48_05435 | Not Available | Negative | 970585 - 971328 | 26431.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | EGT48_05440 | Not Available | Negative | 971325 - 971870 | 20195.2 |
| hypothetical protein | EGT48_05455 | Not Available | Positive | 973238 - 973435 | 7688.51 |
| tonb-dependent receptor | EGT48_05460 | Not Available | Positive | 973542 - 975689 | 79181.7 |
| transcriptional regulator | EGT48_05465 | Not Available | Negative | 976060 - 976704 | 24652.3 |
| phosphoadenosine phosphosulfate reductase | EGT48_05470 | Not Available | Negative | 976689 - 977912 | 48402.0 |
| pig-l family deacetylase | EGT48_05475 | Not Available | Positive | 978960 - 979613 | 24714.8 |
| glycosyltransferase family 2 protein | EGT48_05480 | Not Available | Positive | 979627 - 980823 | 44753.2 |
| acetyltransferase | EGT48_05485 | Not Available | Positive | 980801 - 981382 | 20648.2 |
| yaio family outer membrane beta-barrel protein | EGT48_05490 | Not Available | Positive | 981384 - 982157 | 29220.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





