Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug/metabolite exporter yeda | EGT48_04890 | Not Available | Positive | 867330 - 868250 | 32196.0 |
| very short patch repair endonuclease | EGT48_04895 | Not Available | Negative | 868239 - 868709 | 17986.6 |
| dna cytosine methyltransferase | EGT48_04900 | Not Available | Negative | 868690 - 870108 | 53467.8 |
| phosphohydrolase | EGT48_04905 | Not Available | Negative | 870175 - 870870 | 25874.8 |
| permease | EGT48_04910 | Not Available | Negative | 870910 - 871275 | 13825.0 |
| hypothetical protein | EGT48_04915 | Not Available | Positive | 871368 - 871571 | 8040.97 |
| hypothetical protein | EGT48_04920 | Not Available | Positive | 871841 - 872956 | 41100.3 |
| molecular chaperone hsp31 and glyoxalase 3 | EGT48_04930 | Not Available | Positive | 873549 - 874400 | 31238.1 |
| hamp domain-containing protein | EGT48_04935 | Not Available | Negative | 874508 - 875866 | 50803.8 |
| dna-binding response regulator hprr | EGT48_04940 | Not Available | Negative | 875866 - 876537 | 24982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





