Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthetic protein flip | EGT48_04840 | Not Available | Positive | 859661 - 860398 | 26964.1 |
| flagellar biosynthetic protein fliq | EGT48_04845 | Not Available | Positive | 860408 - 860677 | 9632.54 |
| flagellar type iii secretion system protein flir | EGT48_04850 | Not Available | Positive | 860686 - 861471 | 28537.3 |
| transcriptional regulator rcsa | EGT48_04855 | Not Available | Positive | 861761 - 862384 | 23527.8 |
| protein dsrb | EGT48_04860 | Not Available | Negative | 862428 - 862670 | 9071.8 |
| duf2525 domain-containing protein | EGT48_04865 | Not Available | Positive | 862779 - 863006 | 8579.66 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | EGT48_04870 | Not Available | Positive | 863302 - 864117 | 30527.1 |
| cellulose biosynthesis regulator yedq | EGT48_04875 | Not Available | Negative | 864114 - 865808 | 64236.5 |
| duf2158 domain-containing protein | EGT48_04880 | Not Available | Negative | 865979 - 866161 | 6678.85 |
| duf808 domain-containing protein | EGT48_04885 | Not Available | Negative | 866240 - 867157 | 32134.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





