Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-cysteine desulfhydrase | EGT48_04690 | Not Available | Negative | 836172 - 837158 | 35188.5 |
| cystine-binding periplasmic protein | EGT48_04695 | Not Available | Negative | 837263 - 838063 | 29040.8 |
| flagella biosynthesis regulatory protein fliz | EGT48_04700 | Not Available | Negative | 838151 - 838702 | 21527.9 |
| rna polymerase sigma factor flia | EGT48_04705 | Not Available | Negative | 838748 - 839467 | 27549.8 |
| flagellin flic | EGT48_04710 | Not Available | Negative | 839631 - 840680 | 36292.2 |
| flagellar filament capping protein flid | EGT48_04715 | Not Available | Positive | 840928 - 842343 | 48831.2 |
| flagella export chaperone flis | EGT48_04720 | Not Available | Positive | 842359 - 842769 | 15020.1 |
| flagellar protein flit | EGT48_04725 | Not Available | Positive | 842769 - 843134 | 13776.6 |
| alpha-amylase | EGT48_04730 | Not Available | Positive | 843212 - 844699 | 56589.2 |
| lipoprotein | EGT48_04735 | Not Available | Negative | 844733 - 845146 | 15032.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





