Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose abc transporter substrate-binding protein | EGT48_04290 | Not Available | Negative | 780219 - 781208 | 35504.8 |
| hypothetical protein | EGT48_04295 | Not Available | Negative | 781294 - 781509 | 8178.15 |
| non-heme ferritin | EGT48_04300 | Not Available | Positive | 782003 - 782506 | 18895.6 |
| duf2766 domain-containing protein | EGT48_04305 | Not Available | Negative | 782584 - 782835 | 9123.11 |
| stress response protein azuc | EGT48_04310 | Not Available | Negative | 782950 - 783036 | 3408.36 |
| hypothetical protein | EGT48_04315 | Not Available | Positive | 783300 - 783623 | 11747.2 |
| non-heme ferritin | EGT48_04320 | Not Available | Positive | 783795 - 784292 | 19424.9 |
| duf2492 family protein | EGT48_04325 | Not Available | Negative | 784330 - 784569 | 8644.22 |
| tyrosine transporter | EGT48_04330 | Not Available | Positive | 784760 - 785971 | 42835.8 |
| amino acid abc transporter permease | EGT48_04685 | Not Available | Negative | 835489 - 836157 | 24802.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





