Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | EGT48_04620 | Not Available | Positive | 827955 - 828179 | 8461.11 |
| Putative excisionase | EGT48_04625 | Not Available | Positive | 828115 - 828378 | 10137.1 |
| Putative integrase | EGT48_04630 | Not Available | Positive | 828347 - 829363 | 38861.5 |
| Attr | Not Available | Not Available | Positive | 829470 - 829549 | Not Available |
| Trna,type:leu,anti_codon:taa; | Not Available | Not Available | Positive | 829494 - 829580 | Not Available |
| Trna,type:cys,anti_codon:gca; | Not Available | Not Available | Positive | 829593 - 829666 | Not Available |
| Trna,type:gly,anti_codon:gcc; | Not Available | Not Available | Positive | 829720 - 829795 | Not Available |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | EGT48_04650 | Not Available | Negative | 829947 - 830495 | 20701.7 |
| Hypothetical protein | EGT48_04655 | Not Available | Negative | 830552 - 832384 | 68192.0 |
| dna-binding response regulator | EGT48_04660 | Not Available | Negative | 832381 - 833037 | 23864.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





