Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FDAARGOS_539 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1317960 bp
Thymine Count
1314735 bp
Guanine Count
1357469 bp
Cytosine Count
1360213 bp
Genome Length
5350663 bp
Protein-coding Genes
4723 genes
Non-Coding Genes
534 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein yebg | EGT48_04035 | Not Available | Negative | 727182 - 727472 | 10717.5 |
| phosphoribosylglycinamide formyltransferase 2 | EGT48_04040 | Not Available | Positive | 727606 - 728784 | 42429.2 |
| khg/kdpg aldolase | EGT48_04045 | Not Available | Negative | 728840 - 729481 | 22267.3 |
| phosphogluconate dehydratase | EGT48_04050 | Not Available | Negative | 729518 - 731329 | 64669.9 |
| glucose-6-phosphate 1-dehydrogenase | EGT48_04055 | Not Available | Negative | 731564 - 733039 | 55707.5 |
| murr/rpir family transcriptional regulator | EGT48_04060 | Not Available | Positive | 733377 - 734246 | 31989.4 |
| pyruvate kinase | EGT48_04065 | Not Available | Positive | 734374 - 735816 | 51374.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | EGT48_04070 | Not Available | Negative | 735948 - 736919 | 37440.6 |
| murein dd-endopeptidase mepm | EGT48_04075 | Not Available | Negative | 737038 - 738360 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | EGT48_04080 | Not Available | Negative | 738376 - 739308 | 33935.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





