Escherichia coli strain FDAARGOS_539

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FDAARGOS_539 is a Gram-negative rod-shaped bacterium that can be found in pairs or as single cells. This strain exhibits a facultative anaerobic metabolism, enabling it to thrive in various oxygen conditions, which is characteristic of many members of the Enterobacteriaceae family. The optimal growth temperature for FDAARGOS_539 is 37.0°C, a temperature that corresponds with the typical mammalian host body temperature, suggesting an adaptation to a host-associated habitat. As a member of the Escherichia genus, FDAARGOS_539 is likely to share common traits with other E. coli strains, including the ability to utilize a range of substrates for growth. However, the specific ecological roles and interactions of this strain within its host environment remain to be detailed in the literature. Given its association with host organisms, it could be inferred that FDAARGOS_539 may play a role in the gut microbiome, contributing to nutrient metabolism and possibly influencing host health. The facultative anaerobic nature of this strain, combined with its optimal growth temperature, indicates a potential versatility that allows it to adapt to fluctuating environmental conditions within its host. This adaptability may provide insights into the ecological dynamics of E. coli strains in gut environments, particularly in response to changes in oxygen availability and nutrient supply.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FDAARGOS_539
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain FDAARGOS_539

Accession NumberRKJN00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4723 genes

Non-Coding Genes

534 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+6977 - 7015Not Available
Beta-lactamase shv-2EGT48_00070Not Available-7125 - 798531517.0
Site-specific recombinaseEGT48_00075Not Available-8168 - 872520604.8
Transposase is26EGT48_00080Not Available+8995 - 969927896.9
AttlNot AvailableNot Available+9738 - 9751Not Available
Bifunctional aac/aphEGT48_00085Not Available+9843 - 1039720497.1
oxacillin-hydrolyzing class d beta-lactamase oxa-1EGT48_00090Not Available+10528 - 1135830881.8
hypotheticalEGT48_00095Not Available+11496 - 1193616281.2
Transposase is26EGT48_00100Not Available-11990 - 1269427896.9
AttrNot AvailableNot Available+12744 - 12757Not Available

Displaying genes 1 – 10 of 5272 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites