Vibrio ponticus strain CAIM 1751 CAIM1751_224

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio ponticus strain CAIM 1751, designated as CAIM1751_224, is characterized by having a single replicon. This trait is significant as it indicates a streamlined genetic structure, which can play a role in the organism's adaptability and replication efficiency in various environments. The genome of this strain is accessible through the accession number RKIK00000000.1, allowing for further study and analysis of its genetic makeup. Vibrio species are often associated with aquatic habitats, and their ecological roles can vary widely, including interactions with marine organisms and contributions to nutrient cycling. The availability of its genomic information may facilitate research into its potential applications in biotechnology or environmental monitoring, particularly in marine ecosystems where Vibrio species are commonly found. The single replicon structure of Vibrio ponticus CAIM 1751 might suggest a particular specialization or adaptation strategy, which could be relevant for its survival in specific ecological niches. Further research into this strain could yield insights into its ecological interactions and potential utility in environmental or industrial microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio ponticus
Strainstrain CAIM 1751 CAIM1751_224

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio ponticus strain CAIM 1751 CAIM1751_224
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio ponticus strain CAIM 1751 CAIM1751_224, whole genome

Gene Summary

Adenine Count

1443627 bp

Thymine Count

1436238 bp

Guanine Count

1154089 bp

Cytosine Count

1178952 bp

Genome Length

5230254 bp

Protein-coding Genes

4551 genes

Non-Coding Genes

150 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system atpase tsshEGH82_12330Not AvailableNegative2649889 - 265250497302.9
dotu family type iv/vi secretion system proteinEGH82_12335Not AvailableNegative2652544 - 265331729789.7
type vi secretion system baseplate subunit tsskEGH82_12340Not AvailableNegative2653320 - 265465450501.8
type vi secretion system lipoprotein tssjEGH82_12345Not AvailableNegative2654661 - 265514618440.8
type vi secretion system-associated fha domain protein taghEGH82_12350Not AvailableNegative2655149 - 265662155067.3
type vi secretion system baseplate subunit tssgEGH82_12355Not AvailableNegative2656625 - 265763838053.1
type vi secretion system baseplate subunit tssfEGH82_12360Not AvailableNegative2657602 - 265937167574.6
type vi secretion system baseplate subunit tsseEGH82_12365Not AvailableNegative2659376 - 265981315903.2
type vi secretion system contractile sheath large subunitEGH82_12370Not AvailableNegative2659816 - 266129155551.6
type vi secretion system contractile sheath small subunitEGH82_12375Not AvailableNegative2661332 - 266183518385.9

Displaying genes 2441 – 2450 of 4699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.