Frigoribacterium sp. PhB160

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB160 is a bacterium characterized by having a single replicon, which is indicative of its genomic structure. The organism is cataloged under the accession number RKIE00000000.1, facilitating its identification and analysis in genomic databases. The classification of Frigoribacterium sp. suggests it belongs to a group of bacteria that are typically found in cold environments, which may influence its metabolic processes and ecological niche. This adaptation to cold habitats could provide insights into its physiological characteristics, including its potential for surviving in extreme conditions. The study of Frigoribacterium sp. PhB160 contributes to our understanding of microbial diversity, particularly in environments where low temperatures prevail. Such organisms may play critical roles in biogeochemical cycles, including nutrient cycling in cold ecosystems, and could have applications in biotechnology, particularly in processes requiring cold-active enzymes. Overall, Frigoribacterium sp. PhB160 exemplifies the adaptability of microorganisms to specific habitats, highlighting their ecological significance and potential utility in various fields.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB160
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB160 Ga0304879_14, whole genome shotgun

Gene Summary

Adenine Count

453160 bp

Thymine Count

448604 bp

Guanine Count

1208525 bp

Cytosine Count

1227919 bp

Genome Length

3338443 bp

Protein-coding Genes

3042 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseEDF38_2574Not AvailablePositive2737983 - 273872925844.4
type iii secretion system (t3ss) sseb-like proteinEDF38_2575Not AvailablePositive2738729 - 273956229188.3
hypothetical proteinEDF38_2576Not AvailableNegative2739559 - 273993913047.3
translation initiation factor 3 (bif-3)EDF38_2577Not AvailablePositive2740081 - 274081827077.2
large subunit ribosomal protein l35EDF38_2578Not AvailablePositive2740822 - 27410167076.85
large subunit ribosomal protein l20EDF38_2579Not AvailablePositive2741047 - 274143314305.4
trmh family rna methyltransferaseEDF38_2580Not AvailablePositive2741514 - 274233828808.5
amino acid abc transporter atp-binding protein (paat family)EDF38_2581Not AvailablePositive2742421 - 274315826658.6
amino acid abc transporter substrate-binding protein (paat family)EDF38_2582Not AvailablePositive2743206 - 274406930204.9
amino acid abc transporter membrane protein 1 (paat family)EDF38_2583Not AvailablePositive2744188 - 274486523780.6

Displaying genes 2561 – 2570 of 3113 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.