Frigoribacterium sp. PhB118

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB118 is characterized by having a single replicon, which indicates a streamlined genetic structure. Its genomic sequence is cataloged under the accession number RKID00000000.1, providing a unique identifier for researchers interested in studying its genetic makeup and potential applications. While specific metabolic pathways and ecological roles of Frigoribacterium sp. PhB118 are not detailed in the available data, the genus Frigoribacterium is generally associated with cold-adapted bacteria, often found in polar or cold environments. This adaptability suggests potential applications in biotechnology, particularly in processes requiring low-temperature conditions, such as bioremediation or the production of cold-active enzymes. The presence of a single replicon may also imply a simpler regulatory and replication mechanism, which could be advantageous for survival in extreme environments. Understanding the genomic characteristics of Frigoribacterium sp. PhB118 could provide insights into how microorganisms adapt to cold habitats and their potential roles in nutrient cycling within these ecosystems. This knowledge can contribute to broader ecological studies on microbial diversity and resilience in the face of climate change.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB118
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB118 Ga0304878_113, whole genome shotgun

Gene Summary

Adenine Count

508940 bp

Thymine Count

508156 bp

Guanine Count

1257613 bp

Cytosine Count

1242393 bp

Genome Length

3518026 bp

Protein-coding Genes

3245 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trehalose 6-phosphate phosphataseEDF21_1372Not AvailablePositive1478363 - 147913927897.0
formate/nitrite transporter foca (fnt family)EDF21_1373Not AvailablePositive1479267 - 148007629265.5
hypothetical proteinEDF21_1374Not AvailablePositive1480220 - 14805019784.99
putative abc transport system permease proteinEDF21_1375Not AvailableNegative1480603 - 148200047109.9
putative abc transport system atp-binding proteinEDF21_1376Not AvailableNegative1481997 - 148280328624.0
hypothetical proteinEDF21_1377Not AvailableNegative1482841 - 148338618447.2
hypothetical proteinEDF21_1378Not AvailablePositive1483595 - 148407416739.9
hypothetical proteinEDF21_1379Not AvailablePositive1484071 - 14843107934.52
protocatechuate 3,4-dioxygenase beta subunitEDF21_1380Not AvailablePositive1484662 - 148564532942.9
beta-glucanase (gh16 family)EDF21_1381Not AvailableNegative1485721 - 148659030917.8

Displaying genes 1371 – 1380 of 3301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.