Frigoribacterium sp. PhB24

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB24 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RKIC00000000.1, providing a unique identifier for reference in genomic databases. The ecological significance of Frigoribacterium sp. PhB24 may relate to its potential adaptations to cold environments, as suggested by the genus name "Frigoribacterium," which implies a preference for low-temperature habitats. Such bacteria are often found in polar regions, glaciers, and cold ocean waters, where they contribute to the microbial diversity and functioning of these ecosystems. Understanding the characteristics of Frigoribacterium sp. PhB24 may offer insights into its role in biogeochemical cycles, particularly in cold environments where microbial activity can influence nutrient cycling and organic matter decomposition. This strain may also hold potential for biotechnological applications, especially in processes that require microbial activity at low temperatures. Overall, Frigoribacterium sp. PhB24 exemplifies the diversity of microbial life adapted to extreme conditions and underscores the importance of studying such organisms to unravel their ecological roles and potential benefits in biotechnological contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB24
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB24 Ga0304875_109, whole genome shotgun

Gene Summary

Adenine Count

506593 bp

Thymine Count

508617 bp

Guanine Count

1224750 bp

Cytosine Count

1217475 bp

Genome Length

3458741 bp

Protein-coding Genes

3169 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atpase subunit of abc transporter with duplicated atpase domainsEDF50_0410Not AvailableNegative417510 - 41910857608.8
biotin transport system substrate-specific componentEDF50_0411Not AvailablePositive419257 - 41986220658.7
metal-sulfur cluster biosynthetic enzymeEDF50_0412Not AvailableNegative419959 - 42029112064.4
fe-s cluster assembly atp-binding proteinEDF50_0413Not AvailableNegative420294 - 42107928195.7
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunitEDF50_0414Not AvailableNegative421093 - 42142511351.2
iron-regulated abc transporter permease protein sufdEDF50_0415Not AvailableNegative421425 - 42265143448.3
iron-regulated abc transporter membrane component sufbEDF50_0416Not AvailableNegative422652 - 42407052530.2
cytochrome c oxidase assembly protein subunit 15EDF50_0417Not AvailablePositive424370 - 42533834354.6
n-acetylglutamate synthase-like gnat family acetyltransferaseEDF50_0418Not AvailableNegative425284 - 42579318538.1
protoheme ix farnesyltransferaseEDF50_0419Not AvailableNegative425798 - 42672133690.9

Displaying genes 461 – 470 of 3250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.