Frigoribacterium sp. PhB24

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB24 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RKIC00000000.1, providing a unique identifier for reference in genomic databases. The ecological significance of Frigoribacterium sp. PhB24 may relate to its potential adaptations to cold environments, as suggested by the genus name "Frigoribacterium," which implies a preference for low-temperature habitats. Such bacteria are often found in polar regions, glaciers, and cold ocean waters, where they contribute to the microbial diversity and functioning of these ecosystems. Understanding the characteristics of Frigoribacterium sp. PhB24 may offer insights into its role in biogeochemical cycles, particularly in cold environments where microbial activity can influence nutrient cycling and organic matter decomposition. This strain may also hold potential for biotechnological applications, especially in processes that require microbial activity at low temperatures. Overall, Frigoribacterium sp. PhB24 exemplifies the diversity of microbial life adapted to extreme conditions and underscores the importance of studying such organisms to unravel their ecological roles and potential benefits in biotechnological contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB24
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB24 Ga0304875_109, whole genome shotgun

Gene Summary

Adenine Count

506593 bp

Thymine Count

508617 bp

Guanine Count

1224750 bp

Cytosine Count

1217475 bp

Genome Length

3458741 bp

Protein-coding Genes

3169 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine o-acetyltransferaseEDF50_1075Not AvailablePositive1137321 - 113787218791.8
luxr family two component transcriptional regulatorEDF50_1076Not AvailablePositive1137990 - 113859221581.1
peptidoglycan/lps o-acetylase oafa/yrhlEDF50_1077Not AvailableNegative1138642 - 113981742181.3
emrb/qaca subfamily drug resistance transporterEDF50_1078Not AvailableNegative1139980 - 114148852247.6
prc-barrel domain proteinEDF50_1079Not AvailableNegative1141754 - 114211012843.3
mosc domain-containing protein yiimEDF50_1080Not AvailableNegative1142253 - 114284320676.7
dna polymerase iii epsilon subunit family exonucleaseEDF50_1081Not AvailablePositive1142990 - 114458556397.6
hypothetical proteinEDF50_1082Not AvailableNegative1144601 - 11447234586.18
gaf domain-containing proteinEDF50_1083Not AvailableNegative1144833 - 114554625879.6
antar domain-containing proteinEDF50_1084Not AvailableNegative1145590 - 114625522981.1

Displaying genes 1121 – 1130 of 3250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.