Frigoribacterium sp. PhB24

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Frigoribacterium sp. PhB24 is a bacterial strain characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RKIC00000000.1, providing a unique identifier for reference in genomic databases. The ecological significance of Frigoribacterium sp. PhB24 may relate to its potential adaptations to cold environments, as suggested by the genus name "Frigoribacterium," which implies a preference for low-temperature habitats. Such bacteria are often found in polar regions, glaciers, and cold ocean waters, where they contribute to the microbial diversity and functioning of these ecosystems. Understanding the characteristics of Frigoribacterium sp. PhB24 may offer insights into its role in biogeochemical cycles, particularly in cold environments where microbial activity can influence nutrient cycling and organic matter decomposition. This strain may also hold potential for biotechnological applications, especially in processes that require microbial activity at low temperatures. Overall, Frigoribacterium sp. PhB24 exemplifies the diversity of microbial life adapted to extreme conditions and underscores the importance of studying such organisms to unravel their ecological roles and potential benefits in biotechnological contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. PhB24
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. PhB24 Ga0304875_109, whole genome shotgun

Gene Summary

Adenine Count

506593 bp

Thymine Count

508617 bp

Guanine Count

1224750 bp

Cytosine Count

1217475 bp

Genome Length

3458741 bp

Protein-coding Genes

3169 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease-8EDF50_0993Not AvailableNegative1052234 - 105303429544.5
endoribonuclease l-pspEDF50_0994Not AvailableNegative1053044 - 105346014046.7
selenocysteine lyase/cysteine desulfuraseEDF50_0995Not AvailableNegative1053457 - 105462038969.1
amino acid abc transporter atp-binding protein (paat family)EDF50_0996Not AvailableNegative1054617 - 105543229324.5
amino acid abc transporter membrane protein (paat family)EDF50_0997Not AvailableNegative1055429 - 105642735704.2
amino acid abc transporter substrate-binding protein (paat family)EDF50_0998Not AvailableNegative1056428 - 105739632942.9
putative transcriptional regulator yheoEDF50_0999Not AvailablePositive1057534 - 105825625476.2
methyltransferase family proteinEDF50_1000Not AvailableNegative1058348 - 105895321531.1
dna-binding marr family transcriptional regulatorEDF50_1001Not AvailableNegative1059075 - 105954516601.6
zip family zinc transporterEDF50_1002Not AvailableNegative1059628 - 106048528337.8

Displaying genes 1041 – 1050 of 3250 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.