Chryseobacterium nakagawai strain BIGb0215

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai strain BIGb0215 is characterized as a rod-shaped bacterium. It is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession number RKHU00000000.1, serving as a reference for researchers studying this organism. Chryseobacterium species are known for their diverse ecological roles and can be found in various habitats, including soil, water, and as part of the microbiota of plants and animals. The rod shape of C. nakagawai suggests a potential for motility and interaction with its environment, which could be advantageous for nutrient acquisition and colonization. The study of C. nakagawai strain BIGb0215 could provide insights into its metabolic capabilities and ecological interactions. Understanding its characteristics and genomic features may shed light on its role within microbial communities and its potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
Strainstrain BIGb0215

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain BIGb0215 Ga0304820_114, whole

Gene Summary

Adenine Count

1862885 bp

Thymine Count

1846765 bp

Guanine Count

1045443 bp

Cytosine Count

1023757 bp

Genome Length

5779812 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminoglycoside 6-adenylyltransferaseEDF65_5154Not AvailableNegative5713497 - 571436634206.6
malate dehydrogenase (quinone)EDF65_5155Not AvailableNegative5714847 - 571635256700.0
hypothetical proteinEDF65_5156Not AvailablePositive5716574 - 57167265824.17
glycerol-3-phosphate dehydrogenase (nad(p)+)EDF65_5157Not AvailableNegative5716735 - 571777538043.0
murein dd-endopeptidase mepm/ murein hydrolase activator nlpdEDF65_5158Not AvailablePositive5718001 - 571903237073.9
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)EDF65_5159Not AvailableNegative5719212 - 572038443354.5
hypothetical proteinEDF65_5160Not AvailableNegative5720401 - 572105423401.3
badm/rrf2 family transcriptional regulatorEDF65_5161Not AvailableNegative5721116 - 572156816747.1
hypothetical proteinEDF65_5162Not AvailableNegative5721592 - 572254235656.8
fkbp-type peptidyl-prolyl cis-trans isomerase fklbEDF65_5163Not AvailableNegative5722689 - 572312315922.2

Displaying genes 5081 – 5090 of 5131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.