Chryseobacterium nakagawai strain BIGb0215

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai strain BIGb0215 is characterized as a rod-shaped bacterium. It is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession number RKHU00000000.1, serving as a reference for researchers studying this organism. Chryseobacterium species are known for their diverse ecological roles and can be found in various habitats, including soil, water, and as part of the microbiota of plants and animals. The rod shape of C. nakagawai suggests a potential for motility and interaction with its environment, which could be advantageous for nutrient acquisition and colonization. The study of C. nakagawai strain BIGb0215 could provide insights into its metabolic capabilities and ecological interactions. Understanding its characteristics and genomic features may shed light on its role within microbial communities and its potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
Strainstrain BIGb0215

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain BIGb0215 Ga0304820_114, whole

Gene Summary

Adenine Count

1862885 bp

Thymine Count

1846765 bp

Guanine Count

1045443 bp

Cytosine Count

1023757 bp

Genome Length

5779812 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator with xre-family hth domainEDF65_5134Not AvailablePositive5689199 - 568959415320.0
pot family proton-dependent oligopeptide transporterEDF65_5135Not AvailablePositive5689762 - 569144162232.8
pot family proton-dependent oligopeptide transporterEDF65_5136Not AvailablePositive5691579 - 569333364334.8
putative nuclease of restriction endonuclease-like (recb) superfamilyEDF65_5137Not AvailablePositive5693393 - 569438538929.4
pot family proton-dependent oligopeptide transporterEDF65_5138Not AvailablePositive5694409 - 569588454449.7
thioredoxin-like proteinEDF65_5139Not AvailablePositive5695926 - 569645920668.1
atp-dependent dna helicase recgEDF65_5140Not AvailablePositive5696610 - 569869780345.6
response regulator receiver domain-containing proteinEDF65_5141Not AvailableNegative5699290 - 569973616957.4
helix-turn-helix proteinEDF65_5142Not AvailableNegative5699729 - 570030422214.0
rimj/riml family protein n-acetyltransferaseEDF65_5143Not AvailableNegative5700604 - 570110719573.0

Displaying genes 5061 – 5070 of 5131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.