Chryseobacterium nakagawai strain BIGb0215

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai strain BIGb0215 is characterized as a rod-shaped bacterium. It is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession number RKHU00000000.1, serving as a reference for researchers studying this organism. Chryseobacterium species are known for their diverse ecological roles and can be found in various habitats, including soil, water, and as part of the microbiota of plants and animals. The rod shape of C. nakagawai suggests a potential for motility and interaction with its environment, which could be advantageous for nutrient acquisition and colonization. The study of C. nakagawai strain BIGb0215 could provide insights into its metabolic capabilities and ecological interactions. Understanding its characteristics and genomic features may shed light on its role within microbial communities and its potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
Strainstrain BIGb0215

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain BIGb0215 Ga0304820_114, whole

Gene Summary

Adenine Count

1862885 bp

Thymine Count

1846765 bp

Guanine Count

1045443 bp

Cytosine Count

1023757 bp

Genome Length

5779812 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell surface protein spraEDF65_4982Not AvailablePositive5512612 - 5519673264412.0
glycine cleavage system h proteinEDF65_4983Not AvailablePositive5519781 - 552015813522.7
vanz like proteinEDF65_4984Not AvailablePositive5520100 - 552051016117.2
s1/p1 nucleaseEDF65_4986Not AvailableNegative5521149 - 552194030161.0
type vi secretion system (t6ss) vasb/imph family proteinEDF65_4987Not AvailablePositive5522381 - 552332236505.4
hypothetical proteinEDF65_4988Not AvailablePositive5523377 - 552427934942.2
hypothetical proteinEDF65_4989Not AvailablePositive5524305 - 552544443019.1
outer membrane protein with beta-barrel domainEDF65_4990Not AvailablePositive5525836 - 552655227381.5
peptidase s41-like proteinEDF65_4991Not AvailablePositive5526585 - 552826762798.2
metallo-beta-lactamase class b indEDF65_4992Not AvailableNegative5528319 - 552903826818.4

Displaying genes 4911 – 4920 of 5131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.