Chryseobacterium nakagawai strain BIGb0215

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai strain BIGb0215 is characterized as a rod-shaped bacterium. It is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession number RKHU00000000.1, serving as a reference for researchers studying this organism. Chryseobacterium species are known for their diverse ecological roles and can be found in various habitats, including soil, water, and as part of the microbiota of plants and animals. The rod shape of C. nakagawai suggests a potential for motility and interaction with its environment, which could be advantageous for nutrient acquisition and colonization. The study of C. nakagawai strain BIGb0215 could provide insights into its metabolic capabilities and ecological interactions. Understanding its characteristics and genomic features may shed light on its role within microbial communities and its potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
Strainstrain BIGb0215

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain BIGb0215 Ga0304820_114, whole

Gene Summary

Adenine Count

1862885 bp

Thymine Count

1846765 bp

Guanine Count

1045443 bp

Cytosine Count

1023757 bp

Genome Length

5779812 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative ompl-like beta-barrel porin-2EDF65_4353Not AvailablePositive4817279 - 481836440940.0
two-component system sensor histidine kinase kdpdEDF65_4354Not AvailablePositive4818680 - 481978942168.4
pas/pac sensor signal transduction histidine kinaseEDF65_4355Not AvailablePositive4819879 - 482159464886.1
hypothetical proteinEDF65_4356Not AvailablePositive4821639 - 482216620272.4
hypothetical proteinEDF65_4357Not AvailablePositive4822207 - 482265617560.3
hypothetical proteinEDF65_4358Not AvailablePositive4822660 - 482337328087.2
putative repeat protein (tigr01451 family)/predicted secreted protein (por secretion system target)EDF65_4359Not AvailableNegative4823505 - 482606694338.5
putative repeat protein (tigr01451 family)/predicted secreted protein (por secretion system target)EDF65_4360Not AvailableNegative4826236 - 482894498518.7
dna ligase (nad+)EDF65_4361Not AvailableNegative4829051 - 483105776374.3
carboxypeptidase family proteinEDF65_4362Not AvailablePositive4831298 - 4834393114981.0

Displaying genes 4291 – 4300 of 5131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.