Chryseobacterium nakagawai strain BIGb0215

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai strain BIGb0215 is characterized as a rod-shaped bacterium. It is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession number RKHU00000000.1, serving as a reference for researchers studying this organism. Chryseobacterium species are known for their diverse ecological roles and can be found in various habitats, including soil, water, and as part of the microbiota of plants and animals. The rod shape of C. nakagawai suggests a potential for motility and interaction with its environment, which could be advantageous for nutrient acquisition and colonization. The study of C. nakagawai strain BIGb0215 could provide insights into its metabolic capabilities and ecological interactions. Understanding its characteristics and genomic features may shed light on its role within microbial communities and its potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
Strainstrain BIGb0215

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain BIGb0215 Ga0304820_114, whole

Gene Summary

Adenine Count

1862885 bp

Thymine Count

1846765 bp

Guanine Count

1045443 bp

Cytosine Count

1023757 bp

Genome Length

5779812 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s5pEDF65_3519Not AvailablePositive3905464 - 390598518216.3
large subunit ribosomal protein l30EDF65_3520Not AvailablePositive3905996 - 39061726358.04
lsu ribosomal protein l15pEDF65_3521Not AvailablePositive3906194 - 390664315919.3
protein translocase subunit secy/sec61 alphaEDF65_3522Not AvailablePositive3906653 - 390803250490.9
translation initiation factor if-1EDF65_3523Not AvailablePositive3908036 - 39082518211.15
lsu ribosomal protein l36pEDF65_3524Not AvailablePositive3908315 - 39084314457.73
small subunit ribosomal protein s13EDF65_3525Not AvailablePositive3908439 - 390881614045.2
ssu ribosomal protein s11pEDF65_3526Not AvailablePositive3908829 - 390921813945.0
ssu ribosomal protein s4pEDF65_3527Not AvailablePositive3909238 - 390984622925.6
dna-directed rna polymerase subunit alphaEDF65_3528Not AvailablePositive3909880 - 391087536893.3

Displaying genes 3471 – 3480 of 5131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.