Chryseobacterium nakagawai strain BIGb0215

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai strain BIGb0215 is characterized as a rod-shaped bacterium. It is notable for possessing a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The strain is cataloged under the accession number RKHU00000000.1, serving as a reference for researchers studying this organism. Chryseobacterium species are known for their diverse ecological roles and can be found in various habitats, including soil, water, and as part of the microbiota of plants and animals. The rod shape of C. nakagawai suggests a potential for motility and interaction with its environment, which could be advantageous for nutrient acquisition and colonization. The study of C. nakagawai strain BIGb0215 could provide insights into its metabolic capabilities and ecological interactions. Understanding its characteristics and genomic features may shed light on its role within microbial communities and its potential applications in biotechnology or environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
Strainstrain BIGb0215

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain BIGb0215 Ga0304820_114, whole

Gene Summary

Adenine Count

1862885 bp

Thymine Count

1846765 bp

Guanine Count

1045443 bp

Cytosine Count

1023757 bp

Genome Length

5779812 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane fusion protein (multidrug efflux system)EDF65_1711Not AvailableNegative1876000 - 187718742456.2
hypothetical proteinEDF65_1712Not AvailableNegative1877189 - 187764417809.3
ribosomal protein s18 acetylase rimi-like enzymeEDF65_1713Not AvailableNegative1877761 - 187827319280.9
putative signal transducing proteinEDF65_1714Not AvailableNegative1878700 - 18789278534.86
l-lysine 6-transaminaseEDF65_1715Not AvailableNegative1878991 - 188031650328.5
aldehyde dehydrogenase (nad+)EDF65_1716Not AvailableNegative1880430 - 188198056447.8
hypothetical proteinEDF65_1717Not AvailablePositive1882117 - 18822665829.13
hypothetical proteinEDF65_1718Not AvailableNegative1882449 - 18826437488.85
spfh domain/band 7 family proteinEDF65_1719Not AvailableNegative1882727 - 188359331874.2
cytochrome c-type biogenesis protein ccsbEDF65_1720Not AvailableNegative1884027 - 1887302123328.0

Displaying genes 1691 – 1700 of 5131 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.